Helix GenoSphere (Claude)

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Query human genomics & longitudinal clinical data

About Helix GenoSphere (Claude) MCP Server

Bring Helix GenoSphere™ — a growing research clinico-genomic dataset of more than 500,000 exome-sequenced participants with linked longitudinal EHR data — directly into Claude. Query gene-level carrier counts and pathogenic variants, determine target genes on curated panels, search standardized medical vocabularies (conditions, drugs, labs), and obtain privacy-protected patient counts for any concept. All responses are aggregated and statistically de-identified, with small groups suppressed to protect participant privacy. A read-only window into population-scale genomics, no SQL required.

Features

Tools

Category

Integrations
Getting Started

Open the Claude listing: https://claude.com/marketplace/connectors/helix-genosphere. Choose Add to Claude and follow the publisher’s setup instructions. The published connector URL is https://mcp.hrn-production.helix.com/mcp. Sign-in: Required. Publisher documentation: https://www.helix.com/resources/helix-genosphere-claude-connector. Availability depends on your plan, region, and workspace settings. This integration has not been authenticated or functionally tested here.

Tools (5)
Functions this server exposes to AI clients

check_gene_availability

get_dataset_overview

get_patient_count

get_variant_frequency

search_concepts

Compatible With
Claude
Claude Desktop